| CD1 |
| 1. Prologue and Main Title | not rated | 6:32 |
| 2. Klingons | not rated | 5:59 |
| 3. Spock's Cabin | not rated | 1:41 |
| 4. The Klingon's Plan | not rated | 1:03 |
| 5. The Mind-Meld | not rated | 2:32 |
| 6. Stealing the Enterprise | not rated | 8:42 |
| 7. Grissom Destroyed | not rated | 1:04 |
| 8. Sunset on Genesis | not rated | 2:18 |
| 9. Spock Endures Pon Farr | not rated | 3:04 |
| 10. Bird of Prey Decloaks | not rated | 3:48 |
| 11. A Fighting Chance to Live | not rated | 3:54 |
| 12. Genesis Destroyed | not rated | 2:43 |
| 13. Returning to Vulcan | not rated | 4:58 |
| 14. The Katra Ritual | not rated | 4:31 |
| 15. End Titles | not rated | 6:19 |
| 16. That Old Black Magic / Tangerine / I Remember You (Bar Source) | not rated | 10:32 |
| 1:09:40 |
| CD2 |
| 1. Prologue and Main Title | not rated | 6:31 |
| 2. Klingons | not rated | 5:58 |
| 3. Stealing the Enterprise | not rated | 8:36 |
| 4. The Mind-Meld | not rated | 2:32 |
| 5. Bird of Prey Decloaks | not rated | 3:48 |
| 6. Returning to Vulcan | not rated | 4:56 |
| 7. The Katra Ritual | not rated | 4:31 |
| 8. End Titles | not rated | 6:20 |
| 9. The Search for Spock (Group 87) | not rated | 3:43 |
| 46:55 |
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